RetrogeneDB ID:
retro_ecab_43
Organism:
Horse ( Equus_caballus )
Location:
2:45732469-45733657 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
92.23 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_43
ATGTCAGAAGGAAACGCCGCGGGCGAGCCCAGCGCTCCGGGAGGGTCCCGACCTCTCGGG
GCCCCGGGGGCTCATCGGAGGCGGCCGGCGCCTCCCCTCACGCCGGGCCGCCTTCCCTCC
ATTTGCTCCAGGGACCTCACCCTCGGGGGAGTCAAGAAGAAAACCTTCACCCCAAATATC
ATCAGTCGGAAGATCAAGGAAGAGCCTGAGGAAGAAGTAACCATCAAGAAGGAGAAGCCT
GAAAGGGATAGAGACCGACAGCGAGAGGGGCACGGGCGGGGCCGGGGTCGCCCAGAAGTG
ATCCAGTCCCACTCCGTCTTTGAGCAGGGCCCCGCTGAAATGATGAAGAAAAAGGGGAAC
CGAGACAAGACAGTGGATGTCTCGGACATTGGGCCCTCTCACATCATCAACAGCAAAAAA
GAGAAGAGGGAGACAGATGAAGAAACAAAACAGATCTTGCGCATGCTGGAGAAGGATGAT
TTCATCCATGACCCTGGGCTGAGGAATGACACTCGAAACATGCCTGTGCAGCTGCCGCTG
GCTCACTCAGGATGGCTTTTTAATAAAGAGAATGAAGAACCGGATGTTAAACCTTTGTTG
GCTGGCCCCAAGGAAGAGGACGTGGAGGTGGATGTGCCTGTTTTGAAGGTGAAAGAGGAG
CCACGAGCCAAGGAGGAGGAGGCCAAGGTGAAGGCTCCCAGAGCAGCCGGAAAGACCCCG
GGCCTCCCGAAGGATGTCTCTGTGGCAGAGCTGCTCAGGGAGCTGAGCCTTGCCCAGGAG
GAAGAGCTGCTGTTCCTCCAGCTGCCGGACACGCTCCCTGGCCAGCCACCTACTCAGGAC
ATCAAGCCTATCAAGACAGAGGTGCAGAGTGAGGATGGACAGACGGTGGTTATAAAGCGG
GAGAAAGACCGGGAAGCCAGGCTGGCGGAGAATGCTTGTACCCTGGCTGACCTGTCAGAG
GGCCAGGTTGGCAAGTTGCTCATCCGCAGGTCGGGGAAGGTGCACCTCCTCCTGGGCAAG
GTGACTCTGGATGTGACCGTAGGGACCGCCTGCTCTTTCCTGCAGGAGCTGGTGTCTGTG
GGCCTTGGAGACAGTAGGACAGGTGAAATGATAGTCCTGGGACATGTAAATCACAAACTT
GTGTGTTCCCCGGATTTTGAATCCCTCTTGGATCACAAACACCGGTAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.23 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.19 |
| SRP021940_placental_villous | 0.45 |
| SRP021940_synovial_membrane | 0.52 |
| SRP021940_testis | 0.24 |
Parental protein coverage
Changes in the retrocopy sequence
