RetrogeneDB ID:
retro_ecab_431
Organism:
Horse ( Equus_caballus )
Location:
18:43281154-43281935 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
83.65 %
Coverage:
98.49 %
Frameshifts:
2
Stop codons:
0
Parental gene:
Parental gene symbol:
NDUFS3
Parental gene aliases:
No gene alias available
Parental gene description:
NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7710]
Genomic region (view in browser)
>retro_ecab_431
GCGGTGGCAGTGGCTAGGGGCTGGTGGTGGGGGCTCGTGGGGGCCGTGGCACTGGCCAGA
GTGGCCAGGCAACCCTTGGTACTGTTGCTGCCAGTGAGGATGGAAAGCACTTCAGTGGAC
ACGCGCCCCACTGTCAGACCATGGAATGATGTGGCCCACAGGCGGCTCTCAGCTTTTGGA
GAGTACGTGGCTGATATCCTGCCCAAATATGTCCACCAAGTTCAGGCGTCCTGCTTCAAT
GAGTTAGAGATCTGTATCCATCCTGAGGGATCATCCCAGTGCTGACTTTCCTCAGGGATC
ACACCAACGCACAATTCAAATCCCTGGCTGACCTGATGGCAGTGGACATCCCCACCCAGC
AGAACCATTTTGAGATTATTTACAACCTGTTCTCTCTGCGCTTCAACTCCCGGATCCCTG
TGAAGACCTACACAGATGAGCTGACGTCCATCGAGTCCACTGTCTCTGTGCACAAGGCAG
CCAACTGGTATGAGAGGGAAATCTGGGACATGTTTGGAGTCATCTTTGCTAACCACCCTG
ACCTAAGAAGGATCCTGACAGACTATGGCTTCCAGGGACATCCTTTCTGGGAAGACTTCC
CCTTGTCTGGCTATGTTGAGCTACGCTATGATGATAAGGTGAAGTGGGTGGTGGCTGAGC
TGGTGGAGTTGGCCCAAGAGTTCCCCAAGTTTGACCTGAACAGCCCATGGGAGGCTTTCC
CTGCCTATCTCCAGCCCCCTAGTATCTCAAGCTTGAAGCCGGAGATGAGAAACCTGAAAC
C
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.03 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
