RetrogeneDB ID:
retro_ecab_44
Organism:
Horse ( Equus_caballus )
Location:
X:52050454-52051270 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
57.76 %
Coverage:
54.27 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
OTUD6B
Parental gene aliases:
No gene alias available
Parental gene description:
OTU domain containing 6B [Source:HGNC Symbol;Acc:24281]
Genomic region (view in browser)
>retro_ecab_44
ATGGAAGATTCACAGCGGATGGTACGACGCCACTACCGCGAAAAGAAAGAGCTGCAGGCC
CGCATCCAGAGCATGAAGAACTCTGTCCCCAAGAGCGACAAGGAGAGAAGAAAGCAGTTG
CTCCTCGACGTCGCCCGCCTCAAGGCCGAGATGGAGCAGAAGCACCAGCAGGAGCTGGAG
AAGTTCCAAGAGAGTTTTCCCGATGACAGCAACCTCGATTCTGTCACTGAAGATCTTGCC
AAGATGGATCTCGAGAACCAGCCTCCCCGCCTCGCAAAGGCACAAAGAAGGCGCGAACGA
AGGGCGGCCGAGGAGGCAGCGCGCCTGGAGAGGATCGCTGAGGTGGAGGCGGAGCGTCAG
GCCGGCTTCCGCCACGACGACGAGGAAGAGAAGCTCTCCGCCATCCTGGAGGCCAGAAAT
CTGGAGATGAAGGAAATCCCAGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAG
CTGGTGTTCCCGGTGACCGTGGAGAGCCTGCGGCGTCGCACCGCCAACTACCTGAGGAAG
CACGTCGACGACTTCCTGCCCTTCTTCAGCGACTCCGAAACCGGCGACACCTGCAGCCGC
GACAGCTTCTTGAGTTACTGCGACGACATCGTGCACAGCGCGTTGTGGGGAGGCCAGCTC
GAGCTGAGGGCCCTGTCGCACGTCCTGCAGACCCCCATCGAGGTGATCCAGGCCTACTCT
CCCGTCCTCGTCATCGGGGAGGAGTACGCCAAGAAGCCGCTCACCCTCGTCTACCTGCGC
TACTCCTGCAGCCTCGGGGAGCACTACAACTCGGTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 22.49 |
Parental protein coverage
Changes in the retrocopy sequence
