RetrogeneDB ID:
retro_ecab_450
Organism:
Horse ( Equus_caballus )
Location:
18:55206524-55207232 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
72.88 %
Coverage:
53.27 %
Frameshifts:
0
Stop codons:
3
Parental gene:
Parental gene symbol:
FUCA1
Parental gene aliases:
No gene alias available
Parental gene description:
fucosidase, alpha-L- 1, tissue [Source:HGNC Symbol;Acc:4006]
Genomic region (view in browser)
>retro_ecab_450
GTTGATGAGTTGGGAACAGCTGTTCAGAAGAGGAACATATGCTATGGACTCTATCATTCA
TTCTTAGAATGGTTCCATCCACTCTACCTACTTGATAAGAAAAATGGCTTTGAAACATAG
CATTTTGTCAGTGTGAACACAATGCCAGAGTTATATGACATTGTTAACAGGTACAAATCT
GACCTGATTTGGTCTAATGGAGAGTGGAAATGTCCTGATACTTAGCAGAAGTCTACAAAT
TTTCTTTCTTGGCTTTACAATGATAGCTCTGTCAAGGATGAGGTGGTAGTAAATGACTAA
TGGGACCAGAAATGTTCCTGTTACCCTGGAGGATACTACAACTGTCAAGATAAATGCAAG
CCAGAGAGGTTGCTAGATCACAAGTTGGAGACATGTACCACTGTTGACAAGTCATCCTGG
GGCTATCATGGGGACATGGCCATGCCTGACATTGCAAATGAATCTGAAATCATTTCAGAA
CTCGTTCAGACAGTAAGTTTGGGAGGTAACTATCTTCTTAACATTGAACCAACTAAAGAT
GGACTGATTGTTCCCATCTTCCAAGAAAGGCTTTTTGCTGTTGGGAAACGGCTGAACATC
ACTGGGGAGGTTATTTATGCATCTAAACCATCAAGGGTACAATCAGAGAAGAATGTGATA
TCTATATGGTATATCTCAAAAGGATCAGGAGTCTTAACCTTCAGTCTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
