RetrogeneDB ID:
retro_ecab_46
Organism:
Horse ( Equus_caballus )
Location:
4:51359377-51360262 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
97.28 %
Coverage:
99.66 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
RPSA
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_46
TCCGGAGCCCTTGACATCCTGCAAATGAAGGAGGAGGATGTCCTCAAATTCCTTGCAGCA
GGAACACACTTAGGTGGCACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAAAGG
CAAAGTGATGGCATCTACGTCACAAATTTGAAGAGAACCTGGGAGAAGCTACTGCTGGCA
GCTCGTGCCATTGTAGCCATTGAAAACCCAGCTGACGTCAGTGTCATATCCTCCAGGAAT
ACTGACCAGCGAGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCACTCCTATTGCTGGC
CGCTTCACTCCTGGAACCTTCACTAACCAGATCCAGGCAGCCTTCCGGGAACCGAGACTT
CTGGTGGTAACTGATCCCAGGGCTGACCACCAGCCTCTCACAGAGGCGTCTTATGTCAAC
CTGCCTACCATTGCTCTGTGTAACACAGACTCTCCCCTGCGCTATGTGGACATCGCCATC
CCATGCAACAATAAGGGAGCTCACTCTGTGGGTCTGATGTGGTGGATGCTTGCCCGGGAA
GTTCTGCGCATGCGGGGTACCATCTCCAGTGAACACCCATGGGAGGTCATGCCTGATCTC
TACTTCTACAGAGATCCTGAAGAGATTGAAAAGGAAGAGCAGGCTGCTGCCGAAAAAGCT
GTGACCAAGGAGGAATTTCAGGGTGAATGGACTGCTCCTGCTCCTGAGTTCACTGCTACT
CAACCTGAGGTTGCAGACTGGTCTGAAGGTGCGCAGGTGCCCTCTGTGCCTATTCAGCAG
TTCCCTACTGAAGACTGGAGTGCTCAGCCTGCCGCTGAAGACTGGTCTGCAGCTCCCACT
GCTCAGGCCACTGAGTGGGTAGGAACAACCACTGAGTGGTCTTAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.7 |
| SRP021940_cerebellum | 0.25 |
| SRP021940_embryo | 0.98 |
| SRP021940_placental_villous | 0.4 |
| SRP021940_synovial_membrane | 1.9 |
| SRP021940_testis | 0.47 |
Parental protein coverage
Changes in the retrocopy sequence
