RetrogeneDB ID:
retro_ecab_460
Organism:
Horse ( Equus_caballus )
Location:
19:22019873-22020449 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
83.59 %
Coverage:
55.78 %
Frameshifts:
2
Stop codons:
1
Parental gene:
Parental gene symbol:
KHDRBS3
Parental gene aliases:
No gene alias available
Parental gene description:
KH domain containing, RNA binding, signal transduction associated 3 [Source:HGNC Symbol;Acc:18117]
Genomic region (view in browser)
>retro_ecab_460
TTCCTCATTCCTGACTATAATGATGACCTCAGGCAAGCACACCTCCAGGAATTAACATAT
TTGAATGGTGGCTCAGAAAATGCAGATGTACCCATTGTTTGAGGGAAATCCACCTTGCAT
ACAAGAGGTATCCTAACCCCAGCAATAACCAGGGGAAGGGGAGGAGTCACGGCCCAGCAG
GGTGGAGTTGGTGTGCCACAAGGGATGCCAACTTCCAGGGGAGTCCTTTCCACCAGAGGG
CCAGTGCATCAGGGAAGAGGACTGCTCACTCCCAGAGCAAGAGGAGTGCCCCCAACTGGG
CAGACCTCCACAGCCAGCCCCAACACAAGAGACCTATGGAGATTATGACTATGATGTGGA
TATGACACTGCTTATGATGAACAGAGTTATGATTCCTATGATGACAGCTATAGCACCCCA
GCCCAAAGTGGTGCTGATGACTATGATTATGGACATGGAGTCAGTGAAGAGACTTATGAT
TCCCATGGGCAAGAGGAGTGGCCTAACTCAAGACACAAGGCACCTTCAGCGAGGACAGCA
AAGGGCATCTACAGAGACCATCCCTATGGCAGATAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
