RetrogeneDB ID:
retro_ecab_468
Organism:
Horse ( Equus_caballus )
Location:
19:4319138-4319635 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
60.36 %
Coverage:
68.31 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
ATP1B3
Parental gene aliases:
No gene alias available
Parental gene description:
ATPase, Na+/K+ transporting, beta 3 polypeptide [Source:HGNC Symbol;Acc:806]
Genomic region (view in browser)
>retro_ecab_468
GGTTTGATCTTGATCTTGTGCCTAGTGTTTTATGGGTTCCTGGCTGCACTCTTTTCGTTC
TAATGTGGGCTACACTTCGGACTGTGAACGATGAGGTTCCAAAATATCATGATCAGATTG
CTAGTCTAGAATTAGGGCTTTTCAAAAAACAGCGAGTGCCTTAGAATACATGTTCAGTGT
GTCTGACCCAAATTCCTATAAAGGGTACATAGAAGACATTTGAAAGTTTCTAAAGCCATG
TGATTTAGAAGGACAGAAGAAGCACACAGTCTGTCCTGATGCAGCACTTTTTGAACAGAA
AAGTCCAATTTATGTTGCACGTCAGTCTCCTGTTTTCTTACTTGAAGAATGCAGTGGTGT
GCATGATCCTGATTTTGGCTCTTCAAAAAGGAAGCCCTTGTATTCTTGTAAAAATAAACA
GAATAAGTAGATTAAAGCCTCAAGGAAAACTAAGGATAGCAGTGGTTCAAAAATGAAAAT
ACAGCAGTTCTATCAAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
