RetrogeneDB ID:
retro_ecab_477
Organism:
Horse ( Equus_caballus )
Location:
19:48397426-48397768 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
96.49 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PPDPF
Parental gene aliases:
No gene alias available
Parental gene description:
pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:16142]
Genomic region (view in browser)
>retro_ecab_477
ATGGCAGCCATCCCCTCCAGCGGCTCACTCGTGGCCACCCACGACTACTACCGGCGCCGC
CTGGGTTCCACTTCCAGCAACAGCTCCTGCGGCAGCGCCGAGTACCCTGGGGAAGCCATC
CCCCACCACCCCGGTCTCCCCAAGGCCGACCCGGGTCACTGGTGGGCGAGCTTCTTTTCT
GGGAAGTCCACTCTCCCGTTCATGACCACAGTGTTGGAGTCCCCAGAGCACTCGGAGTCC
CCCCAGGCCTCCAGCAGCACCATCACGTGTGACCTGGCTCCAGAAGCCTCGAGGAAGCAG
CCTGGTGGCCAGCCTGCCAAAGCCAATGCTGGGCCCCGGTCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 4.59 |
| SRP021940_cerebellum | 3.34 |
| SRP021940_embryo | 6.13 |
| SRP021940_placental_villous | 2.41 |
| SRP021940_synovial_membrane | 2.27 |
| SRP021940_testis | 8.54 |
Parental protein coverage
Changes in the retrocopy sequence
