RetrogeneDB ID:
retro_ecab_481
Organism:
Horse ( Equus_caballus )
Location:
2:5978412-5979278 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
76.35 %
Coverage:
80.17 %
Frameshifts:
8
Stop codons:
0
Parental gene:
Parental gene symbol:
SLC25A3
Parental gene aliases:
No gene alias available
Parental gene description:
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 [Source:HGNC Symbol;Acc:10989]
Genomic region (view in browser)
>retro_ecab_481
GGCGGCATGCTGAGCTGCCGCTGACGCACACGGCCATCGTGCCCTGGACCTGGTCAAGTG
CCGCATGCAGGTGGACCCCGGCAAGTACTCAGGGCATCCTCAGCGGCTTCTGGCGTGACG
CTGCGGGACGAACGGGCTGCGCGACCTGGCCCGACGACTGAGACCCCGAACTTTCCTGGG
CTACTCGCTGCAGAGACTCTTCAAGTACGGCCTGTACGAGATCTTCAAAGTACACTACGC
GGAGCGCCTGAGCCCGAGAGGGGCTACGCCTGGAGGACCGGCCTGTACCTGACCGCCTCG
GCCAGCGCCGAGTTCTTCGCCCGACGTGGCGCTGGCCCCCATGGAGGCGGTGAAGGTGCG
CATCCAGACGCAGCCCGGCTTCGCCCCGCACGCTGCGGGCCGCCGCCCCGCGCATGTACG
GCGAGGAGGGCCTGCGGGCCTTCTACAAGGGCGTGGCGCCGCTCTGGCTGCGGCAGATCC
CCTACACCATGATGAAGTTCGCCTGCTTCGAGCGCACGGTGGAGGCGCTCTACACCTACG
TGGTGCCCAAGCCCCAGAGCCAGTGCTCCAAGGCCGAGCAGCTGGCCGTGACCTTCGTGG
CCGGCTACATCGCCGGCGTCTTCTGTGCCGTCGTGTCCCACCCGGCCGATTCCGTCGTGT
CCGTTTTGAACAAGGAGAAAGGCAGCACGGCCTTCGGGGTTCTCCGCAGACTGGGGTTCT
GGGGCGTGTGGAAGGGCCTGTTCGCCCGGATCATCATGATCGGCACCCTGACTGCGCTGC
AGTGGTTCATCTACGACTCGGTCAAGGTCTATTTCAAGCTGCCTCGCCCTCCGGTCCCGC
AACCGCCCGAATCCCTGAAAGAGCAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.13 |
| SRP021940_synovial_membrane | 0.03 |
| SRP021940_testis | 28.24 |
Parental protein coverage
Changes in the retrocopy sequence
