RetrogeneDB ID:
retro_ecab_5
Organism:
Horse ( Equus_caballus )
Location:
20:20744599-20745172 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
57.75 %
Coverage:
89.05 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
HDGF
Parental gene aliases:
No gene alias available
Parental gene description:
hepatoma-derived growth factor [Source:HGNC Symbol;Acc:4856]
Genomic region (view in browser)
>retro_ecab_5
ATGTTTTTTTTCGGGACCCACGAGACGGCCTTCCTGAGCCCCCAACGCCTCTTCCCGTAC
GAGGAGGCCAAGGAGAAGTTCGGCAGGCCCAACAAGAGGAGGGGGTTCAGCGCGGGGCTG
TGGGAGATCGAGAACAATCCTACCGTCCAGGTCGCCGGCCAGCCCCTGGCCCAAGAGCAG
AGCTGCGCGGAAGGGCCACCGCCGGCGTCCGAGGCCACCGAGGGCGACGGGGACCAGGAG
AGCATCGCCGACGGCGACAGTGATGAGCAGGGGAAGCCCGGCGTCGACCAGACGGTCCAG
GAGGCGGGCGAGAAGGGGCCGCTGAAGAGGAGCGCGGGGGAGCTGCCGGAGGACGCCGCC
AAGCGTCCCAAGGAGGCCGCGCCAGAAGCGGAGGAGGAGGAGGCCGCCGGGGAGGCCGCG
CTGCTGCTGGAGCCGGAGGAGGAGGACGCCAGCGCCACGGCCCAGCCAGGCCTGGCAGGA
GGGTCGCCCCCAGAGCAGCGGGAACCCAAGGAGGAGGCCGCCGAGAAAGACGTCGAGGCC
CCAGGCGTTGGAGAAGGTCGCGAGAGCCTGTAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.13 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 278.46 |
Parental protein coverage
Changes in the retrocopy sequence
