RetrogeneDB ID:
retro_ecab_530
Organism:
Horse ( Equus_caballus )
Location:
2:117607569-117608133 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
95.21 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1
Parental gene:
Parental gene symbol:
RPL18
Parental gene aliases:
No gene alias available
Parental gene description:
60S ribosomal protein L18 [Source:RefSeq peptide;Acc:NP_001182442]
Genomic region (view in browser)
>retro_ecab_530
ATGGGAGTCGACATCCGCCACAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGC
CAGGACATCTACCTGAGACTGTTGGTCAAGCTGTACAGGTTTCTGGCCAGACGAACCAAC
TCCACCTTCAACCAAGTCGTGCTGAAGAGGCTGTTCATGAGTCGCACCAACCAGCCACCT
CTGTCCCTTTCCCACATGATCCGGAAGATGAAGCTTCTTGGCCGGGAAAACAAAACAGCT
GTGGTTGTAGGGACTATCACCGACGACGTGCAGGTCCAGGAGGTGCCCAAACTGAAGGTG
TGTGCCCTGCGTGTGAGCAGTCGTGCCCGGAGCCGCATCCTCAAGGCTGGGGGCAAGATC
CTCACCTTCGACCAGTTGGCCCTGGACTGCCCGAAGTGCTGTGGCACCGTCCTGCTCTCT
GGTCCTCGAAAGGGCCGAGAGGTGTACAGGCATTTCGGCAAGGCTCCAGGGACCCCGCAC
AGCCACACCAAACCCTATGTGCATTCCAAGGGCCGCAAGTTCGAGCACGCCTGAGGCCGA
CGGGCCAGCCGGGGCTACAAAAAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.93 |
| SRP021940_cerebellum | 0.7 |
| SRP021940_embryo | 1.77 |
| SRP021940_placental_villous | 1.25 |
| SRP021940_synovial_membrane | 0.83 |
| SRP021940_testis | 1.13 |
Parental protein coverage
Changes in the retrocopy sequence
