RetrogeneDB ID:
retro_ecab_577
Organism:
Horse ( Equus_caballus )
Location:
21:28580984-28581610 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
83.81 %
Coverage:
77.99 %
Frameshifts:
1
Stop codons:
1
Parental gene:
Parental gene symbol:
APOOL
Parental gene aliases:
No gene alias available
Parental gene description:
apolipoprotein O-like [Source:HGNC Symbol;Acc:24009]
Genomic region (view in browser)
>retro_ecab_577
CATTTACAAATGAGCTTTGCATCCATCCGTGCTACAACTGGTCATTATATTGGCTGATGC
AAGGGTGTGTACGACTTTGTAAAAAATGGGATGATGGATACAGAACAATTTGGAAAAGAT
GCGTATGTCTACCTGAAAAATCCACCTCGAGATTTTCTTCTGAAAATTGGAGTCATTACA
GTCTCAGGGTTGGCAGGCTTGGTTTCAGCAAGAAAAGGTTCTAGGTTTAAGAAAATTGCT
TATCCAATGGGGCTGGCCACTTTAGGAGCATCTGCTTGCTACTCAGTTCAGTCGGTAATA
ATTGCGAAGGTAACTAGAAGAAAGGCATATGCTACAAGCAGCCAATTTACGAGGCAGTTA
AATCATTGCAGACAAAGAACAACAAAAAAGAGCCACTTCCTGAACCTAAAGAAACAACTA
AGCTAGGAAGGTCTGTTGGGATAGAAATACCTGCAAAAATGACTCACAACCTGAAACACT
CAGTGCCTTTGCCAACAGAACTCAGCCCTGAAACAAAGACCGAATCAGAATCCACCTCAG
GTGCTACACACTTTATGCCTGACCCCAAGCTCATGGATCACAGGCAGTCCCACCCAGAAG
ATGTAGATGTGTACAGCACTAGAAGC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
