RetrogeneDB ID:
retro_ecab_603
Organism:
Horse ( Equus_caballus )
Location:
23:9686435-9687174 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
61.18 %
Coverage:
100.0 %
Frameshifts:
4
Stop codons:
7
Parental gene:
Parental gene symbol:
RPS6
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S6 [Source:HGNC Symbol;Acc:10429]
Genomic region (view in browser)
>retro_ecab_603
CTGAACATCTCCTTCCCAGCAACTGGCTGCTAGGAACTCATTGCATTGGAGGATGAATGC
AAACTTCCTACCTTTATGAGAAGAGTATGGATGCAGAAGTTGCTGCTGATGCTCTGGGCG
AAGAATGGAAGGGTTGTGTGGTCCAGATCTGTGATGGGAATGACCAATAAGGTTTCCCCA
TGAAGCAGGCTGTCTGGACCCATGCCTGTGTCTGCTTGCTACTGAGTAAGAGGCACTCAC
TCCTGTTATAGCCCAAGGAGAACTGGAGAAAGGAAGCACAAATCTGGTTGAGGTGGCTTG
TGGATGCCACTCTGAGTGTTGTCAACATGGTTATTATGAAAAAAAGGGAGAAGGATATTC
CTGTACTGACTGATACTAATGTGCCTTGTTGCCAGGCGCCCCCAAAGAGCTGTCAGAATC
TGCAAATTTTCAGTCTCTCTAAAGAAGATGGTGTCTGCCAGTGTGTTGTGAGAAAGCTCC
TGAACAAAGAAGGGAGGAAAAGTAGGATCAAAGTGCTCAATATGCAGTGTCTTGTTACTC
CACGTATCCTGCAAGACAAACGTCAGTAAATTGCTTTGAAGAAAGTGCACTAAAGAAAAT
AAGGACAAGTCTGCAAATATGATCAACTGTGGCCAAGAGAATGAAGGAGGCCAAAGCAAA
ATGCCAGGAACAGATTGCCAAGAGGCAGAGGCTATCCTTTGTCAGAGCTTCTACCTCTAA
GTCTGAGTCCAGTCAAAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
