RetrogeneDB ID:
retro_ecab_61
Organism:
Horse ( Equus_caballus )
Location:
10:22335488-22336925 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.12 %
Coverage:
56.73 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_61
GCTTTTAGGAAAAGCTCATACCTCTCAAAACATGAGAGAATTCATTCTGCACAGAGACCT
TACAAATGTAATGAGTGTGGCAAAGCTTTTAATAAGTGCTTGAACCTTAGTAGACATCAG
AAAATCCATACAAGAGAGAAACCATATAATTGTGATGTGGGTGGCAAAATCTTTCATCAG
AATTCAAACCTTGCAAGTCATCAGAGAATGGATACTGGCGAGAAACCTTACAAATGTAAT
GACTGCAGCAAGGCCTTTGCTAAACACTCAAGGCTTACTCAACATAAAAGAGTCCATACT
GGAGAGAAACCTTACAAATGTAATGAATGCAGCAAAGCCTTTGCTAGATGTTCAAGCCTT
ACTCAGCATAAGAGAATCCATACTGGAGAGAAACCTTACAAATGTAGTGAATGCAGCAAA
GCCTTTGCTGAACACTCAAAGCTTACTCAACATAAAAGAATCCATACTGGAGAAAAACCT
TACAAATGTAATGAATGCAAGAAAGCCTTTGCTAGACATTCAAGCCTTACTCAACATAAG
AGAATCCATACTGGAGAGAAACCTTACAAATGTAATGAATGCAGCAAAGCCTTTCCTAGA
CACTCAATGCTTGCTCAACATAAAAGAATCCATACTGGAGAAAAACCTTACAAATGTAAT
GAATGCAGCAAGTCCTTTGCTAAACGCTCAAGGCTTACTCAACATAAAAGAATCCATAAT
GGAGAGAAACCTTACAAATGTAGTGAATGCAGCAAAGCCTTTGCTAGACATTCAGGTCTT
ACTCAACATAAGATAATCCATACTGAAGAGAAACCTTGCAAATGTAGTAAGTGTGGCAAG
GTATTTAGTCAAAAGTCAAGCCTTGAAAGTCATCAGAGAATTCATACTGGTGAGAAACCT
TACAAATGTAATGAGTGTGGCAAATCTTTTACCCATTTTGTGTGCCTTAAAAGACATCAG
AAAATCCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAATCTTTTAACCGA
TTTGAAAGCCTTACAATACATCAGAAAATCCATACTGGAGAGAAACCTTACAAATGTAAT
GAGTGTGGTAAAGCCTTTATGGATGTTTCATACGTTACTCGACATAAAAAAATCCATACT
GGAGAGAAACCTTTCAAATGTAATGAGTGTGGCAAAACTTTTATGCAGGGTTCACATCTT
ACTCGACATAAGAAAATCCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAG
GTCTGTAATCAAAAGTCAAACCTTGCAATTCATCAGAGAATTCATACTGGAGAGAAACCT
TACAAATGTAATGAATGTGGCAAAGTGTTTGCTGAGCGTTCAAGACTTACTCAGCATAAG
AGAATCCATACTGGAGAGAAACCTTTCAAATGTACTGAGTGTGGCAAAACTTTTATG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.52 |
| SRP021940_cerebellum | 0.15 |
| SRP021940_embryo | 1.58 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.18 |
Parental protein coverage
Changes in the retrocopy sequence
