RetrogeneDB ID:
retro_ecab_62
Organism:
Horse ( Equus_caballus )
Location:
X:81739381-81740221 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
79.84 %
Coverage:
77.88 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
MORF4L1
Parental gene aliases:
No gene alias available
Parental gene description:
mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989]
Genomic region (view in browser)
>retro_ecab_62
NCTCGTGGACAACAATCTGCAGAAGAAGACAACTTCAAAAAACCAACTAGAAGCAATATG
CAGAGAAGTAAGATGAGAGGGGCCTCCTCAGGAAAGAAGACAGCTGGTCCACAGCAGAAG
AATCTGGAACCGGCTCTCCCTGGCAGGTGGGGGGGTCGCTCTGCGGAGAACCCGCCTTCA
GGATCTGTGAGGAAGACAAGAAAGAACAAACAGAAGACTCCTGGAAACGGAGATGGTGGC
AGTACCAGCGAAGCACCTCAGCCACCTCGGAAGAAAAGGGCCCGGGCAGACCCCACCGTT
GAAAGTGAAGAGGTGTTTAAGAATAGAATGGAAGTTAAAGTGAAGATTCCTGAAGAATTA
AAACCATGGCTTGTCGAGGACTGGGACTTAGTTACCAGGCAGAAGCAGCTGTTTCAACTC
CCTGCTAAGAAAAATGTAGATGCCATTCTGGAAGAGTATGCAGATTGCAAGAAGTCGCAG
GGAAATGTCGATAATAAGGAATATGCGGTTAATGAAGTCGTGGCAGGAATAAAAGAATAT
TTCAACGTGATGTTGGGCACTCAGCTGCTCTACAAATTTGAGAGGCCCCAGTATGCTGAA
ATCCTCTTGGCTCACCCTGATGCGCCGATGTCCCAGGTTTATGGAGCGCCACACCTACTG
AGATTATTCGTAAGAATCGGAGCAATGTTGGCATATACGCCCCTTGATGAGAAGAGCCTT
GCATTATTGTTGGGCTATTTGCATGATTTCCTAAAATATCTGGCAAAGAATGCTGCGTCT
CTGTTTACTGCCAGTGATTACAAGGTGGCTTCGGCTGAGTACCACCGCAAAGCCCTGTGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 59.47 |
| SRP021940_cerebellum | 55.86 |
| SRP021940_embryo | 109.34 |
| SRP021940_placental_villous | 102.84 |
| SRP021940_synovial_membrane | 53.29 |
| SRP021940_testis | 45.69 |
Parental protein coverage
Changes in the retrocopy sequence
