RetrogeneDB ID:
retro_ecab_654
Organism:
Horse ( Equus_caballus )
Location:
26:3114202-3115098 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
83.11 %
Coverage:
99.34 %
Frameshifts:
1
Stop codons:
1
Parental gene:
Parental gene symbol:
RPL5
Parental gene aliases:
No gene alias available
Parental gene description:
60S ribosomal protein L5 [Source:RefSeq peptide;Acc:NP_001075354]
Genomic region (view in browser)
>retro_ecab_654
CTGTTCTGCAGGATGGGGTTTGTCAAAGTTGCCAAGAATAAGGCCTACTGCAAGAGATAC
AAGTGAAATTTAGAAGACGACGAGAGGGTAAAACTGATTACTATGCTCAGAAACACTTAG
TAATCCAGGATAAAAATAAGCACAACACACCCAAATACAGGATGATAGTTCATGTAACCA
ACAGAGATGCCATTTGTCAGATGGCTTATGCCCGTATAGAAGGAGAGATGATAGTTTGTG
CAGCTTGTGCTCATGAACTCTTGGAGTTTGGCGCGAAGACTGGCCTCACACATTATGCAT
GCTGCCCTGGCCCGCTGCTGGCCCACACGGTTCTCAATAGGTTTGGCATGGACAAGATCT
GTGAAGGCCAAGTGGAGGTGACCGGAGAGGAACACAACGTGGAAAGCATCGATGGTCAAC
CTGGTGCCTTCACCTGCTATTTGGATGTAGGGTTTGCCAGAACTACTACTGGAAATAAGG
TTTTTGGGGCCCTGAAAGGAGCTGTGGGTGGAGGCTTGTCTATACCTCACAGTACCAAAC
GATCCCCTAGTTATGATTCAGAGAGCAAGGAATTCACTGCAGAAGTACAATGGAAGCACA
TCATGGGTCAGAACATTGCAGATTATATGTGTTACCTGGTGGAAGAGGATGAGGATGCCT
ACAAGAAACAATTTTCTCAGTCCATAAAGAACAATGTAACTCCAGACTTGATGAAAGAGA
TGTGTAAGAAAGCTCATTCTGCTGTATGAGAGAATCCGGTCTATGCCAAGAAGCCTAAGA
AAGAAGTTAAAAAGAAGAGGTGGAACCGTCCCAAGATGTCTCTTGCCCAGAAGAAAGATT
GGGTAGCTCAAAAGAAGGCAAGCTTCCTCAGAGCACAAGAGCAGACCACTGAGAGC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
