RetrogeneDB ID:
retro_ecab_656
Organism:
Horse ( Equus_caballus )
Location:
26:17978559-17979363 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
57.89 %
Coverage:
77.78 %
Frameshifts:
3
Stop codons:
5
Parental gene:
Parental gene symbol:
NIPA2
Parental gene aliases:
No gene alias available
Parental gene description:
non imprinted in Prader-Willi/Angelman syndrome 2 [Source:HGNC Symbol;Acc:17044]
Genomic region (view in browser)
>retro_ecab_656
GAGATGGCCAACTTTACTGTTTATGTTTACAATGGCAAGACTAGTGACTTAGAAGTTTTT
CATGTTCTAGTAAGTGCTATTTTTCTTCATATTTTCTAAACAAAAGACTAAATTTTCATG
GGAAAATTGAGTGCTTGTTAAACTGCCCTCAATCTCCACTTACAGTCATTCATGCTTCAA
AAGAAGAGAAGTTAGAGACTAACAAAATGTCTCACAAGCTAATTGATCTGGGTTTGGGGT
TTTTGAAGTCTTTGTGGTCATTGTGTCGTCTGTGGTAGGATCTTGCTCTAGACAGACCAA
CATTTATATAACAATATGCTCCGTAATTAAAGCATTTTCTGTATCCTGTTTTAAAGGCTT
GGATATTGTTATTAAATAACTTCTTGTGGGAAAGTCTCTTCTGGACATCCCTTGGCTCAT
TCTTCTGCTGAGTTTTATAGTCTGTGTAAGCACACAGATTAATTATCCAAATAGGCCCTA
GATATAATCAACACTTCTACAGTGACTCCGTTATGTTAGGTATTCTTTGAAGCATCAGTT
TTGACTAGTTCAGTTCTTCTTTGAAAGGAGTGACAAGATATGTCTGCTGATAGTACTTTG
AGCTCCTCCTTTACAATTTTGTTGGAAAAAATTTTGTAATATTTTTGTGCCTTTAAAGAC
CTCAGTTTTCATCTACCAAGCCAGCCTATGTCCTTTCAAAAAGATGAAAAAGTAACGAAT
GACAATCACTGTAATACGTATGTATTTCTTAATAATAATGAAAAAAACTTAACTGGTGTA
ATTAAACAGCAAACTGAAGAAAAT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
