RetrogeneDB ID:
retro_ecab_660
Organism:
Horse ( Equus_caballus )
Location:
26:30987780-30988480 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
69.92 %
Coverage:
93.98 %
Frameshifts:
2
Stop codons:
4
Parental gene:
Parental gene symbol:
TMEM106C
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 106C [Source:HGNC Symbol;Acc:28775]
Genomic region (view in browser)
>retro_ecab_660
AAGAGAGAAGATGACAGGGAGGATTTGCAGCCTGAACAAGAGCAGGAAGGAGCCATTGCC
CAGTTCCCACATGTGGAGTACATGTGGTGAGATAGCATTACAGTCTCATGTGTCAAGGGA
CAGGTTACCTTCCAACAGAGGAAGTGAATGAGTAGGTGGGTTCAATCCCACACAGAGATC
AGAGATTGTGCCCTCAGAGAACTAAGCAGTGTGTCCTCCTGTCCACCCTGTTCTGTCTCC
TGGCATCTGAGTGGGGGTATTCTTCCTGCTTCTGCATTCAGTCCTTGCGGATGATTATAG
CATCAAAGTAGTGAAAGTCACGTTTAATAAGCAGAACTCCCCTGTAATCCTTGCCAACAT
GGCCACCCTGAAAATCAGGAACTCCAACTTCTACCCTATGGGAGGAGCCAGCCTGTCCAG
TCATGTTCAGTACATGAACACAATGTTTGGGACATATACGACAACTAATGCTTCCTTCAT
TTGACCTTGGAGTGAGCAACTGGTGAATTTTACCACAAAGGCTGAGATGGGAGTACCATT
TTCCTATGTGTGCTTTTTCTGCATAGTACCTGATGTCCTGGACCACAACATAGTGATCTT
CATGTGAACTTCCGTGAAGCTTTCATTCATTGGCCACATGACCTGGAGATCCTTGGAGAC
ACATCACTATGTGGATTGTGGAGCAAATTCCATAGCTGTT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
