RetrogeneDB ID:
retro_ecab_665
Organism:
Horse ( Equus_caballus )
Location:
26:22034730-22035311 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
67.35 %
Coverage:
60.0 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
MRPL1
Parental gene aliases:
No gene alias available
Parental gene description:
mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:14275]
Genomic region (view in browser)
>retro_ecab_665
AAGTCATATCACTATATGGAAAATGATCCTGAGGATGTCAATTTAAAACACTTGTACCTG
TGGCAGATATATGAGGTGAAGAAATCTATTCACATACTTAAAAATTTTCAAATTCTGGAC
TTTGTTAATCCAAAACAAGATGTTTATCTTGATTTGACACTGAATATTTCACTTGAGAAA
AAGATAAAAGTGGAGCCATTTGCCACTGTTCTTAGTTTTCCATATCCATTCACATCAGAA
ATCAATAAAGTTGCTGCATCTAAAGGAAATGCATCAGAGATTAAAACAGCAGAAGAAAAC
AGAGGTGCCTTTGCAGAAAGAACTAATCTGATTCAGAGGATTTTGCATGATGAAATTCAT
GTAGACGTTTATGTATCTGTTTAGAAATAACGTCAGAGATTAATCCATTAGAAAAGAAAC
TGATAAAAGATTTTTCAAAATTTATTCAAAATTCCTTTGACCTTGACATTCACCAAATGC
TAGAATTGTTTAAAACTGGGCGTGAAATTAAGGTATATGAAGAAAGGGAGAACTTTCTAG
AAACCAAAATAGCAACATTGGATCAAGTGACCAGACAGCTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
