RetrogeneDB ID:
retro_ecab_668
Organism:
Horse ( Equus_caballus )
Location:
27:621463-622180 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
60.08 %
Coverage:
67.12 %
Frameshifts:
11
Stop codons:
3
Parental gene:
Parental gene symbol:
MAP2K2
Parental gene aliases:
No gene alias available
Parental gene description:
mitogen-activated protein kinase kinase 2 [Source:HGNC Symbol;Acc:6842]
Genomic region (view in browser)
>retro_ecab_668
TCTCTGGACCAGGCATTGAAGGAAGCCAAGAGAATTCCCAAGAGATTCTGGGGAAGCTCC
ACATTGCAATTCCCTGAGGCTTGGGGTATCCCCAAGAAAAGCACCCCAATCATGCACCAA
GATGTGAAATCTTCTAACAGCCTCGTCAACTGCAGAGGGGAGATCAAGCTGTGAAATTTT
GGGGTGAATGGGCAGCTCGACTCCACAGCCAACCCCTTTGTAGGAACTCATTCCTACACA
TCTCTGAGCAGTTGCAAGACACTCACTGCTTGGTGCAGTCAGGCATCGGGAGCACGGCCT
GTCCCTCAGAAGCTGTCCGTGGGAAGGTACCCCATCCCTTTCCTGATGCCAAGGAGCTGA
GGCCGTATCTGGCTGGGCCATGGTCGGGGGAGTGGAAGGAGAGCCTCCTAGCATCTTCCG
AAGACCAAGAGCACCTGGACACCCCACAGTGGCCACAGATGGATAGTTGGCCAGCTCTGG
CCGTCTTGGAACTGCCGGATGGTATTGTGAAGGAGCTTCTTTCCAAGCTGCCACCAGCAC
CTTCACTCAGGACCTCAAGGAGTTTCAAATAAATGCCTAATTGAGAACCCAGCACATCTG
AAGATGCTCATGAGCCAGGCTTTATCAAATGGTACAAATGGTTGAAGTGTATTTGTCAGC
TGGTTGTGTAAAATGCTGCCACTGAACCAGCCTGGCACACCCATGTGCACCTCCATG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
