RetrogeneDB ID:
retro_ecab_678
Organism:
Horse ( Equus_caballus )
Location:
27:3332056-3332603 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
60.64 %
Coverage:
100.0 %
Frameshifts:
3
Stop codons:
6
Parental gene:
Parental gene symbol:
RPL17
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L17 [Source:HGNC Symbol;Acc:10307]
Genomic region (view in browser)
>retro_ecab_678
AAAATGGGTCATTGCTCACTTAACCTGGAAACCCCCATAAAATCATGCAAATCAAGAGGT
TCAAATCTTCGTGTTCACTTCAAGGATACCTGTGAAACTGCCCAGGCCATGTAGGACATG
CGTATCTGAAAAGCCTACTAGTCTCTGAGAGATGCCACTTTACAGAAGCCACGTGTGCCA
TTAGGTGGTTACAATGGTGCCACTGTAGATGTGCCCAGACCCAACAGTGGGGTTGGACAC
AGGGTCAGGGACCCAAAAAGAGTGCTGAATTTTTGTTGCATATACTTAGACACGCAGACA
GTAATGCTGACCTTCAGGATTTAGATGTCAGTTCTCTGGTCAAAGAGCTCACCCAGGCGA
GCAAAGCCTCCAGAATGCACCTGTAGACTTGCAGAGCTCTTGGACCGTATATAACCTCTG
AGTGAGTTCCTCCAGCCGCATTGAGATCACCTTTCCTGAAACAGAATAAATTGTTCCCAA
ACCCGAAGACGAGGTTGCACAGCAGAAAAAGATATCCCAGAAGCAACAAAAGCTTATGGC
TTGGGAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.07 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
