RetrogeneDB ID:
retro_ecab_711
Organism:
Horse ( Equus_caballus )
Location:
3:32072072-32072329 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
52.87 %
Coverage:
88.54 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
SEC61B
Parental gene aliases:
No gene alias available
Parental gene description:
Sec61 beta subunit [Source:HGNC Symbol;Acc:16993]
Genomic region (view in browser)
>retro_ecab_711
GTGGGCCGGGCCCTGGTGGACCCGCACAGGCTCCTCGGAGCCCTCCCAGTGGGGTCCCGG
GCTGCCCCGGGCAGAGGAAGAAGCCGGCGTGGGACGGGGAGCGCAGGCCGCACGACCTTG
GCAGGCTCTGGGGGGCCGGGGCGATCCTGCACAGAGGGTCACCGGGCCTCAGCGTCGGCC
CTGTGCCATTACTGGTTGTGAGTCTTCTGATCGCTGCTTCTGTATTTATGTCGCACATTT
GGAGCAAGGACATTCGG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.23 |
| SRP021940_cerebellum | 0.2 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.08 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
