RetrogeneDB ID:
retro_ecab_712
Organism:
Horse ( Equus_caballus )
Location:
3:32729729-32730536 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
95.17 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1
Parental gene:
Parental gene symbol:
YBX1
Parental gene aliases:
No gene alias available
Parental gene description:
Y box binding protein 1 [Source:HGNC Symbol;Acc:8014]
Genomic region (view in browser)
>retro_ecab_712
TCAACGAAGGTTTTGGGAACAGTAAAATGGCTCAATGTAAGAAACGGATATGGTTTCATC
AACAGGAATGACACCAAGGAAGATGTATTTGTACACCAGACTGCCATAAAGAAGAATAAC
CCCAGGAAGTACCTTCGCAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAA
GGAGAAAAGGGTGCGGAGTCGGCAAATGTTACAGGTCCTGGTGGAGTTCCAGTGCAAGGC
AGTAAATATGCAGCAGACCGTAACCATTATAGACGCTGTCCACGTCGCAGGGGTCCTCCA
CGCAATTACCAGCAGAATTACCAGAATAGTGAGAGAGGGGAAAAGAATGAGGGATCGGAG
AGCGCTCCCGAAGGCCAGGCCCAACAGCGCCGGCCCTACCGCAGGCAACGGTTCCCACCT
TACTACATGCGGAGACCCTATGGGCGTCGACCACAGTATTCCAACCCTCCTGTGCAAGGA
GAAGTGATGGAGGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAGTGAGGCAG
AATATGTATCCGGGTTATAGACCACGATTCCGCAGGGGCCCTCCTGGCCAAAGACAGCCC
AGAGAGGATGGCAATGAAGAAGATAAGGAAATTCAAGGCGATGAGACCCACGGTCAGCAG
CCACCTCAACGTCGGTACCGCCGCAACTTCAATTACTGACGCAGATGCCCAGAAAACCCT
AAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCT
CCCCAGGCTGAGCAGGGCGGGGCTGAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.12 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.03 |
| SRP021940_testis | 0.18 |
Parental protein coverage
Changes in the retrocopy sequence
