RetrogeneDB ID:
retro_ecab_713
Organism:
Horse ( Equus_caballus )
Location:
3:38370784-38371481 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
61.22 %
Coverage:
75.71 %
Frameshifts:
5
Stop codons:
0
Parental gene:
Parental gene symbol:
EIF3G
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 3, subunit G [Source:HGNC Symbol;Acc:3274]
Genomic region (view in browser)
>retro_ecab_713
ATTGTCCACAGCTTCAGAATTGAGATCTAGAAGAGCTCAAAGGCCATTTCAAGGAGGAAG
AACTGGAAGAAGTTTGGGAACTCAAAGTTTGACCAATGTGGCCACCAGCACAGTCAGTGG
TGATGTGCCCGTGACTGTTCATCAAAGAGGATTTGAACTGCCAGGAGGACCCGATGAACA
AGCTCAAGGGCCAGAAGGTTGAGTTCTGCCGCATCTGCAAGGCAACAACTGGAGGACTCG
TTGCCCCACACAAGGATACACTGTGGCCCGTGCAAAAGGAGCTGGCCGAGAAGGTGGGAC
TGTCCACTGGCAAGAAGGCAAAGTTGCCCAAACAGTTGGACCCTATGTATACAGCCCAAA
ACAAGACAGGGAAGTATGTGCCATGAGCCTGCGGGTCAGGGCCAGCCACTGTGGGAAGTC
CACACAGCCCAATCACACAGTTGATGACAATGCCATCATCTTCGTTTCCACCCTGTCAGA
GGACACTCATGATACTGACCTGCAGGAGCTCTTCCAGTCCTTTGGCTCCATCTTATGCAT
CTACCTGGCAAAGGACAAGACCACTGGCCAGTCCAAGGGCTTTGCCGTCATCAGATTTCA
CAGCTATGAGGACACCTCAAGTGCCCTTGCTGACATGTCCAGCTGTGGCTGTGACCACCT
CATCCTCAGTGTCAAGTGGGTCAAGCCCTCAACCAAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
