RetrogeneDB ID:
retro_ecab_714
Organism:
Horse ( Equus_caballus )
Location:
3:39219756-39220578 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
58.78 %
Coverage:
97.86 %
Frameshifts:
4
Stop codons:
2
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_714
AGGAGACAAAGGAATATGTTCCAAATAAGGGAACAGGACAGTTCCTCAGAAAAAGAGCTA
AACAAAACAGAGATAAACAATCTACTTGATAAAGAGTACAAACTAATACTCATAAGGATG
CTTACTGATCTGGGGAGAAGAATAGATGAACACAGTGAGAACTTCAACAAAGAACTAGAA
AATATGAAAAAGAACCAATCAGAGCTGAAGAATACAATAATGGAAATGAAAATTTCACTT
GAGGGAATCAACAGCAGAGTAGATGACACAGAAGAACTGATCAGCCATCTGGATGACAGA
GTAGAGGAAATAGCCTAAGCTGAACAGAAAAAAAGAAAAAAGAATTAAAAAAAATGAGGA
CAGTCTAAGGGACCTCTGGGACAACATCAAATGTATTAACACCTGCATTATAAATGTCCC
AGAAGGAAAAGAGAAAGACAAGGGGCACAGAACTTATTTGAAGAAATAATACCTGAAAAC
TTCCGTAACCTGAGAAAGGAAACAGATATCCAGGTACTGGAAACACCGAAAGCACCACAC
AAGATGAATCCAAAGAGGCCCACACCAAGACACATTATAATAAAAATGTCAAGAATTAAA
GATAAGGAGAGAATCCTAAAAGCTGCAAGAGACAAGCAATAAGTTACATACAAAACCCCC
CATAAATCTATAAGCTGACTTTTCAGCAGAAACTTTACAGGCTAGAAGGGAGTGGCACTA
TATACTCAAAGTGATGAAAGAAAAAACCTACCATCAAGAATACTGTACCTGGCAAGGTTA
TCATTCAGAATTGAAGGAGAGATAAAGAGATTTACAGATGAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
