RetrogeneDB ID:
retro_ecab_715
Organism:
Horse ( Equus_caballus )
Location:
3:51232181-51232479 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.55 %
Coverage:
99.01 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
ENY2
Parental gene aliases:
No gene alias available
Parental gene description:
enhancer of yellow 2 homolog (Drosophila) [Source:HGNC Symbol;Acc:24449]

Genomic region (view in browser)





>retro_ecab_715
GTGCTTAGCAAGATGAACAAAGATGCGCAGATGAGAGCAGCAATGAACCAAAAGTTGATA
GAAACTGGAGAAAGAGAAGACGTCAAAGAGTTGCTGAGAGCTAAATTAATTGAATGTGGC
TGGGAGGATCAATTGGAGGCCCACTGTAAAGGGAATTAAAGAAAAAGGACTAGAACACGT
TACTGTTGATGACTTGGTGGCTGAAATCGCGCCAGAAGGCCGAGGCCTGGCAGCTGGCAG
GGTAGAGGAGGAGCTCCCACAAAGGGTAAGAGTGTGCCCTGCTCAGCGTGCCCGCCTT

Library Expression (reads per million mapped reads)
SRP021940_articular_cartilage 0.0
SRP021940_cerebellum 0.0
SRP021940_embryo 0.02
SRP021940_placental_villous 0.0
SRP021940_synovial_membrane 0.0
SRP021940_testis 0.0

Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VVSKMNKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCK-EVIKEK-GLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA
V.SKMNKDAQMRAA.NQKLIETGERE..KELLRAKLIECGW.DQL.AHCK....K.K.GLEHVTVDDLVAEI.P.GR.L....V..EL.QR.R...AQ.A
Retrocopy
VLSKMNKDAQMRAAMNQKLIETGEREDVKELLRAKLIECGWEDQLEAHCK/RELKKK/GLEHVTVDDLVAEIAPEGRGLAAGRVEEELPQRVRVCPAQRA


Parental protein
SL
.L
Retrocopy
RL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide