RetrogeneDB ID:
retro_ecab_726
Organism:
Horse ( Equus_caballus )
Location:
3:75220458-75221167 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
77.27 %
Coverage:
97.95 %
Frameshifts:
3
Stop codons:
0
Parental gene:
Parental gene symbol:
SFR1
Parental gene aliases:
No gene alias available
Parental gene description:
SWI5-dependent recombination repair 1 [Source:HGNC Symbol;Acc:29574]
Genomic region (view in browser)
>retro_ecab_726
GTACACCAGGATTTCATTTTCAAGATGGACAGCCCATCAGACTCAGCTATGGTTTCACGT
CGCACACCACAGGCTTGTGCCAGGTCACCGTCTCCCCATACCAGTAGTTCAAGAAAACAA
CCTATGAGTGCAACACTTAGAGAACGATTAAGGAAAACCAGATCTTCATTTAATTCCTGT
TACAGTATGGTAAAACGTCTCAAAGTAGAGAATGAAGATGATCAGAACCTTTCAGAGAAA
CCAGCAACTTCAGTAGAAGAAAACCGTGTGGAATTTCGAGAAGATTTTAAACACAGACAG
TGAATTTGAAGAAAATACGTATTTGAAAAATACCTTCGAGAATATCAATGCATGTGAATC
TGATTCACTCGATGCTGGGTCATGCAGTGAGGATCTCCAAAATGACTTTGTGAATGAGAA
TCTTCCCCAAAAAGGATTAAATGAAGAAAAAGCAAAATTGGTGAAGCAGATTCAGGAGAA
AGAGGACCTTCTTCAGAGGCTGAAACTAGTCAAAATGTACAGATCAAAGAATGACCTATC
TCAGTTACATTGTTAATAAAGAAGTGGAGAAGCTGTAGCCAGCTGTTGCTTTACGAGTTA
CAGTCAGCTGTCCGAGGAAAACAAGAAACTCAGCCTTACTCAGTTGATAGACTACTATGG
CTTAGATGATAAATTGCTACCCTATAACAGAAATGAAGAAGAATTTATA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
