RetrogeneDB ID:
retro_ecab_73
Organism:
Horse ( Equus_caballus )
Location:
4:50247718-50248675 (-)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
92.77 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PRPS1
Parental gene aliases:
No gene alias available
Parental gene description:
phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462]
Genomic region (view in browser)
>retro_ecab_73
ATGCCAAATATAAAAATCTTCAGCGGCAGCTCCCACCAGGACTTATCCCAGAAAATTGCG
GACCGCCTGGGCCTGGAGCTAAGCAAGGTTATGACCAAGAAATTCACCAACCAGGAGACC
TGCGTGGACATTGGTGAGAGTGTGCATGGAGAGGATGTCTACATAGTGCAGAGTGGTTGT
GGTGAAATCAACGACAATCTAATGGAGCTTTTGATCATGATTAATGCCTGCAAGATTGCT
TCAGCCAGCCGGGTTACCGCAGTCATCCCGTGCTTCCCTTATGCCCGGCAGGATAAGAAG
GATGAGAATCGGGCCCCAATCTCTGCCAAGCTTGTTGCAAATATGCTGACTATAGCAGGT
GCAGATCATATCATCACCATGGACCTACATGCTTCTCAAATTCAAGGCTTTTTTGATATC
CCAGTAGACAACTTGTATGCAGAGCCCGCTGTCCTGAGGTGGATAAGGGAGAATATCTCT
GAGTGGAGGAACTGCATTATTGTCGCGCCAGATGCTGGTGGAGCCAAGAGAGTGACCTCC
ATTGCAGACAGATTGAATGTGGACTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAGC
AAAGTGGACCACATGGTGTTGGTGGGAGATGTGAAGGATCGTGTGGCTATCCTTGTGGAT
GACATAGCTGACACCTGTGGTACAATTTGCCATGCAGCTGACAAACTTCTCTCAGCCGGA
GCCACCAGAGTTTATGCCATCTTGACTCATGGAATCTTTTCTGGCCCAGCCATTACTCGC
ATCAACAGTGCGTGCTTGGAAGCAGTAGTGGTCACCAATACCATACCTCAGGAGGATAAG
ATGAAGCATTGCTCCAAAATACAGGTGATTGGCATCGCCATGATCCTTGCGGAAGCCATC
AGGAAAACTCACAATGGGGAATCTGTTTCCTACCTATTCAGCCATGTCCCTTTATAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 31.69 |
Parental protein coverage
Changes in the retrocopy sequence
