RetrogeneDB ID:
retro_ecab_737
Organism:
Horse ( Equus_caballus )
Location:
3:19496761-19497180 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
69.23 %
Coverage:
53.64 %
Frameshifts:
3
Stop codons:
5
Parental gene:
Parental gene symbol:
EMC3
Parental gene aliases:
No gene alias available
Parental gene description:
ER membrane protein complex subunit 3 [Source:HGNC Symbol;Acc:23999]
Genomic region (view in browser)
>retro_ecab_737
GTGCTCGACTCCAGCAGGAGCCTCTGGGTGGTTTTGCCCATCTTTATCATCACTTCTTTG
CAGGTATGAGCCACCACTGTGGTCCACAGTGCTGCAGAGTGACAAGAAGCTCACCCGGGA
GCAGGTATCTGACAGTTAAGTCTTAATTTGAAGCATAGTCCTCAGGGAAAATGCAAATTA
TATTCCCAAATAGTTCTTCTTGACATGAAAATATTGCTTCAACAACCCAGAGGATAGATT
TTTCAAAAAAAAATGAAGCAAAAATAGTACGAACTTCTCCTATGACTGATCCCACTATGC
TCACTGACATGATAAAAGGGAGTGTACCAATCTTCCTCCCTATGATTCTTATTGGTGGAT
AGATCAACACGATATTCTCGGGCTTTGTCACAACCAAAGTCCTATTTCCAATGACCCTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.45 |
| SRP021940_embryo | 0.55 |
| SRP021940_placental_villous | 0.36 |
| SRP021940_synovial_membrane | 0.52 |
| SRP021940_testis | 0.47 |
Parental protein coverage
Changes in the retrocopy sequence
