RetrogeneDB ID:
retro_ecab_759
Organism:
Horse ( Equus_caballus )
Location:
30:29886197-29886926 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
72.4 %
Coverage:
72.86 %
Frameshifts:
3
Stop codons:
2
Parental gene:
Parental gene symbol:
ANXA2
Parental gene aliases:
No gene alias available
Parental gene description:
annexin A2 [Source:RefSeq peptide;Acc:NP_001116852]
Genomic region (view in browser)
>retro_ecab_759
GGCCGCCTGGAGATGGTGATCGGGGGCCTACTGAAAATACCCACTCGGTGTGACGCTTCC
AAGCTGAAAGCCTCCATGAAGGGGCTGGAGACTGATGAGGACCCCTCACTGAGATCCTGC
TCAAGGACCAACCAGGAGCTTCAGGCAACTAACAGAGCCCACAATGAAAGGTACAAGACT
GATCTGAGAAGGACATTGTTTCTGATACATCTGGTGACTCCCACAAGCTGATGGCTGCCC
TCACACAGCGCAGAAGAGCAGAGGAAGGCTCTGTCATTGATTAAGAACTGAGTGACCAAG
ATGCTCAGGATCGCCACGATGCTGGAGAGAAAGGAAAGGAACTGATGTTCCCAAATGGAC
CAGCATCATGACCGGGCAGAGTGTCTGTCATCTCCAGAAAGTACTTGAAAGATACAAGAG
CCACAGCCCTATGACGTGTTAGGCAGCATCCAGAAGGAGGTCAAAGGACACCCGGAGAAT
GCTTCCCTGGACCTGGTCCAGTGTATTCAGAATAAGCCCCCGTATTTTGCCAACTGACTA
TACGACTCCACGAAGGGCAAGTGGTCACGTGATAAGGTCCTGATCAGAATCACGGCCTCC
CACAGTGAAGTGGACATGTTGAAAATTAGGTCTGAATTCATGAGAAAGTACAGCAAGTCT
GTGTCCTACCACATCCAGCAAGACACCACAGGTGACCGCCAGAAGGTGCTGCTGTGTGGT
TGGGATGAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
