RetrogeneDB ID:
retro_ecab_767
Organism:
Horse ( Equus_caballus )
Location:
31:8524959-8526219 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
94.76 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
2
Parental gene:
Parental gene symbol:
RBBP4
Parental gene aliases:
No gene alias available
Parental gene description:
retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887]
Genomic region (view in browser)
>retro_ecab_767
GCAGCCTTTGATGACGCAGTGGAAGAACGTGTGATCAACGAAGAGTACAAAATGTGGAAA
AAGAACACCCCTTTTCTTTACGATTTGGTGATGACCCATGCCCTGGAGTGGCCCAGCCTG
ACTGCGCAGTGGCTTCCAGATGTGACCAGGCCAGAAGGGAAAGATTTCAGCATTCATCGA
CTTGTCTTGGGGACACACACGTCGGATGAACAAAACCACCTTTTGATAGCCAGTGTGCAG
CTCCCTAACGATGATGCTCAGTTTGATGCTTCACACTACGACAGTGAGAAAGGAGAATTT
GGAGGTTTTGGCTCTGTTAGTGGAAAAATTGAAATACAAATCAAGATCAACCATGAAGGA
GAAGTAAACAGGGCACGTTATATGCCCCAGAACCCTTGCATCATTGCAACAAAGACTCCG
TCCAGTGAAGTTCTTGTTTTTGACTATATGAAACATCCTTCTAAACCAGACCCTTCTGGA
GAGTGAAATCCAGACTTGCGTCTCCGAGGACATCAGAAGGAAGGCTATGGGCTTTCTTGG
AACCCAAACCTCAGTGGGCACTTACTTAGTGCTTCAGATGACCACACCATCTGCCTATGG
GACATCAGTGCCGTTCCAAAGGAAGGAAAAGTTGTGGATGCGAAGACCATCTTTACAGGG
CATACAGCAGTAGTAGAAGATGTTTCCTGGCATCTGCTCCATGAGTCTCTGTTTGGGTCA
GTTGCTGATGATCAGAAACTTATGATCTGGGATACTCATTCAAACAATACTTCCAAACCA
AGCCACTCAGTTGATGCTCACACAGCTGAAGTGAACTGCCTTTCTTTCAATCCTTATAGT
CAGTTCATTCTTGCCACAGGATCAGCTGACAAGACTGTTGCCTTGTGGGGTCTGAGAAAT
CTGAAATTTAAGTTGCATTCCTTTGAATCACATAAGGATGAAATATTCCAGGTTCAGCGG
TCACCTCACAATGAGACAATTTTGGCTTCCAGGGGTACTGATCGCAGGCTGAATGTCTGG
GATTTAAGTAAAATTGGAGAGGAATAGTCCCCAGAAGATGCAGAAGATGGGCCAGCAGAG
TTGTTGTTTATTCATGGTGGTCACACTGCCAAGATATCTGATTTCTCCTGGAATCCCAAT
GAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCACGCAGGTGTGGCAAATGGCA
GAGAATATTTATAATGATGAAGACCCTGAAGGAGGCGTGGATCCAGAAGGACAAGGGTCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 4.12 |
| SRP021940_cerebellum | 4.23 |
| SRP021940_embryo | 7.59 |
| SRP021940_placental_villous | 3.35 |
| SRP021940_synovial_membrane | 2.92 |
| SRP021940_testis | 5.93 |
Parental protein coverage
Changes in the retrocopy sequence
