RetrogeneDB ID:
retro_ecab_772
Organism:
Horse ( Equus_caballus )
Location:
4:2126494-2126877 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
71.32 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
UBA52
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:RefSeq peptide;Acc:NP_001229382]
Genomic region (view in browser)
>retro_ecab_772
ATGCAGATCTTTGTGGAGACCCTGATGGGGAAGACCATCACTCTTGAAGTCCAGCCCAGT
GACACCACTGAGAATGTCAAAGCTAAAACCCAAGACAAGGAGGGCATCCTGCCCGACCAG
CAGTGTCTGGTTTTTGTGGGCAAACAGCTAGAGGATGGCCTCACTCTTACAGAGTACAAT
ATCCAGAAAGAGTGTGCCCTGAACTTGTTGCTTCACCTGCAGGGTAACATCATCGAGCCT
TCCCTCCACCAGCTCGCCCAGAAATACAACAGCAACGAGATGACCTGCCCCAAGTGTCAC
CTCACCTGCACCCCTGCACTGTCAACTGCCACAAGAAGAAGTGTGGCCACATCAACAACC
TGTACCTGAAGAAGAACATCAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.07 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.08 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
