RetrogeneDB ID:
retro_ecab_78
Organism:
Horse ( Equus_caballus )
Location:
3:817668-818988 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
93.22 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_78
ATGGCTTTAGATCTCAGAATCTCATTTCAAGGTGAACCATCCAGGAATGATCCTGGGTTA
GAAAATCACGAGTTTAATCCCAGTCAAGTACCTGCTGTCCAAGAGGGGGAGGGGATCTCT
GAGTTCCCGAGCACTCAACACAGCTTATTTCAAATTGGCAAGAACTCATGTACAAGGAAG
GAACTGCAAAGACTCTATAAGTTATTTCACTCCTGGCTACAGCCAGAAAAACAAAGCAAG
GATGAAATGATTTCTTGTTTGGTCCTGGAACAATTTATGATCAATGGCTACTGCAGTGAC
AGGTCCATGTTGAAAGAGAAATGGGAATCAAGTGGCAGAAACCTGGAGAAATTCATGGAA
GATCTGACCGATGATGGCATGAAGCCACCTTGCTTAGTCCACGTCTGCATGCAGGGGCAG
GACGCTCTCTTTTCTGAGAACATGCCCTTAAGAGAAGTCATCGTTCACCTCACAAAACAG
TTGTTAACAGGAACCCCAACTGGAGAGAACATGGGGACCCCTTTCGGGACTCCCAAAGAT
CATTCCCTGGAAACAGAACAAGGAGATGAAGATAAAGAAAATGGTGGCAACATTTCTTTG
AAAACTTGTCAAGTAAATGACAGTATGACTAGTCAAGACAATCAAACGCCTTCCCTACTC
ATCATCCAGGGAGAGAACCGGCCTGGGCCTGGAGAGGGAGGTGTTCCTTTGGAGAATCCA
CTCAGCTCCAGAAGAGCAGGTCTAGGCACCTGCAGGTCCCAGGAAGAGTCCCTGAAAGGA
CCCCCTTATCAAGATGTCGTTATAGAGGTGGGACCAGGGTTTCTCTCCCGGGCAAACCAG
GTTATGCCTGAGTGTGTTCCTACCCACCAGAGCATTGAGGGAAACTCAGCATGTGGGGGA
CACCAAGAAAGATCCCACAGAGCCCCCAAATCATACAAATGTGAGAAGTGTCCCAGGATC
TTTAGGTATCTGTCTCGGTTAAAAGCCCATCAAAGAAGACACAATAATGAGAGGACATTT
ATTTGTGGCCAGTGTGACAAAGGCTTCTTCCAGGCATCAGACCTACGCGTGCAACAGAAG
ATTCACACAGGAGAGAAACCTTTCAAATGCAGCACATGTGAAATGTCCTTCAGCCACAAA
ACCAACCTTCGGGCTCATGAGAGAATCCACACAGGGGAGAAGCCCTATGTGTGTTCCCTT
TGCCAGAGAAGCTACCACCAGTCATCCACCTACCACCGCCACCTGAGGACTCACCAGAAA
ATTGCTTTCAAAAGTGTTCCCTCCACACCAGATGCTTCCTCGGGTACAGTGCCAATGTAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.3 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.13 |
| SRP021940_synovial_membrane | 0.1 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
