RetrogeneDB ID:
retro_ecab_789
Organism:
Horse ( Equus_caballus )
Location:
4:57032424-57032798 (+)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
88.1 %
Coverage:
76.69 %
Frameshifts:
1
Stop codons:
0
Parental gene:
Parental gene symbol:
SKP1
Parental gene aliases:
No gene alias available
Parental gene description:
S-phase kinase-associated protein 1 [Source:HGNC Symbol;Acc:10899]
Genomic region (view in browser)
>retro_ecab_789
ATGCCTTCAATTAAGTTGCAGAGTTCTGATGGAGAGATATTTGAGGTTGATGTGGAAATT
GCCAAGCAATCTATGACTATCAAGACCATGTTGGAAGATTTGGGAATGAATGATGAAGGA
GATGATGATCCAGTTCCTCTACCAAATGTTAATGCAGAATATTACAAAAGGTCATTCATT
GGTGCACCCAACACAAGGATGACCCTCTTTTTCCTGAGGATGATGAGAACAAGGAAAAGC
AGACAGACGATACCCCAGTTTGGGACCAAGAATCCCTGACAGTTGAACAAGGAACACTTT
TTGAACTTATTCTGGCTGCTAACTACTCAGACATCAAAGGTTTGCTTGATGTTACATGCA
AGACTGTTGCAAAT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.1 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.03 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
