RetrogeneDB ID:
retro_ecab_798
Organism:
Horse ( Equus_caballus )
Location:
4:95205214-95206117 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
74.01 %
Coverage:
53.94 %
Frameshifts:
2
Stop codons:
3
Parental gene:
Parental gene symbol:
TCP1
Parental gene aliases:
No gene alias available
Parental gene description:
t-complex 1 [Source:HGNC Symbol;Acc:11655]
Genomic region (view in browser)
>retro_ecab_798
ACAGACCCTGAAAAACTGCATCAGATTAGACAGAGAAAATCAGATATCACCAAGGGGCAA
ATCCAGAAGATTCTGGAAACTGATGTCAATGTTATTCTAACCACTGATGGAATTGACAAT
ATGTGTCTGAACCATTTTGCAGAGACTGGCACTATAGCAGTTAGAAGAATTTTAAAAAGG
GACCTTAAATGCATTGGTAAAGATTCTGGAGTAATTACTCTGTCAACTCTGGCCAGTTTG
GAAGGCAAAGAAACTTTTGAAGCTTTAATGTTAAGACAAGCAGAAGAGGTGGTACAGGAG
AGAATTCATGATGATGAAGTGATCTTCATCAAAAACACTAAAGCCCATACATCTGCATCA
GCTATCTTTTGTGAAGTGAATGATTTCATGTGTGGTGAGATGGAGTGCTCTTTACAAGAT
GTTCTTTGTGTGGTGAAGAGAGTTTTGGCATCAAAAATCTGTGGTTCCAGGTAGGGGTGC
TGTAGAAGCAGCCTTGTCCATGTATCTTGAAAACTATGCAGTCAGCACAGGGTCCCCGGA
ATAGCTTGCTATTGCAGAGTTGCAAGCTCTCTTCTTGCTATTCCTAATGCATTGGCAGTT
TATGCTTCCCGAGACTCCATAGATCTGGCTGCAAAGTTAAGAGCTTTTCATAATGAGGTT
CAAGTTAACCAAGAATGCAAAAATCTAAAATGGATTAGTCTTGATTTGGTCAATGGAAAA
CCTTGAGACAACAAACAAGCAGAGGTGTGTGAACCAATCATAGTTAAAATTAAGAGTTCG
AAATTTGCAGTGGAGGTTGCAATTACTGTTCTTCAAATTGATATTATTAAATTACACCTA
GAAAGAAAAAAAGATGATAAGTATGGAGGTTATGAAGATACTGTTCACTAGGGAGCCCTT
AAT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
