RetrogeneDB ID:
retro_ecab_822
Organism:
Horse ( Equus_caballus )
Location:
4:94422290-94422709 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
79.43 %
Coverage:
92.72 %
Frameshifts:
1
Stop codons:
2
Parental gene:
Parental gene symbol:
RPS13
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S13 [Source:HGNC Symbol;Acc:10386]
Genomic region (view in browser)
>retro_ecab_822
ATGAGTCGCGTGCGCACTCCTGGGAAGGGCCTGTCCCACTCAGCTCTGCCCTGCCGCCGC
AGAATGCCTGCCTGGCTGAAGGTGACATCTGACGATGTGAAGGGGCAGATCTACAAACTG
GCCAAGAAGGGCCTGGCTCCCTCACAAATTGGTATGGTCCTGAGAGACTCACATGGCGTT
GCACAAGTATGTTTTGTGACAGGCAATAAAATCTTGAGAATTCTTAAGTCCAAAGGACTT
GCTCCTGATCTTCCTGAGCACCTCTAACATTTAATGAAGAAAGCTGTTGCTGTTGAAAGC
ATCTTGAGAAAAACAGAAAGCATAAGGATGCTAAATTTTGTCTGATTCTGATCGAGAGTC
GTAATCACCAGTTGGCTCAGTATTATAAGACCAAATGAGTCCCTCCCCACAACTGGAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.29 |
| SRP021940_placental_villous | 0.13 |
| SRP021940_synovial_membrane | 0.08 |
| SRP021940_testis | 0.24 |
Parental protein coverage
Changes in the retrocopy sequence
