RetrogeneDB ID:
retro_ecab_847
Organism:
Horse ( Equus_caballus )
Location:
5:95544763-95545313 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.62 %
Coverage:
75.51 %
Frameshifts:
7
Stop codons:
3
Parental gene:
Parental gene symbol:
EIF4E2
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:3293]
Genomic region (view in browser)
>retro_ecab_847
AGCAAGTTCGAAGCATTGGAAGATGACGACGGTGGAGTCCCTGATCAGAATGAAGAAAAG
AGTACATAGAAGGATGATGAGAAGGAAAAAAACAGCATAAGGCAGGAGTCAGGCCTGCAG
CCAGAGCAAGGCTGTTGTCCCCGGGCCGCAGAGCATCCCCACAGTATGATACCCTTCCTG
GTGCTCCAGGAGAAACCCAGCCGTCCCTCGAGCCCGCAGAGCTACGAGCAGAATGTCAAG
CAGATTGGCCCCTTTGCCTCCATGGAGCAGGTATGCAGATTTTACAGGCATGTGGTACCT
CTCTGGACCCTGACAGGCCACAGTGACTTCCATCTCTTCAAAGAAGGAATTGAGCCCACA
TGGGAGGATGATGCACATAAAAATGGTGGTGGTAGATGATTTGGCTGTGGAAGGGCGTGG
CATCCTGTTGCTGGGAGAATCTCATTCCGGCCGCGTTGGGGGACAGTTCGGGGTCAGGGA
GGAGATCTGAGGGCCTGTGGTCTCCGTGAGGTTTCAGGAGGACAATATTTCAATATGGAG
TAGCCTGGCA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.18 |
| SRP021940_synovial_membrane | 0.1 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
