RetrogeneDB ID:
retro_ecab_858
Organism:
Horse ( Equus_caballus )
Location:
5:46437211-46437926 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
50.62 %
Coverage:
99.58 %
Frameshifts:
3
Stop codons:
4
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_858
GAAAACCTAGAAAGAAGTCAAAAAGAAATTCTTGAGCTAAAAAGTATAATAACTGAAATG
AAAAATTCACTAGAGGGATTCAAAGGCAGATTTGAGCAGGCAAAAGAAAGTGTTAACAAA
TTTGAAGATAGGGCAATTAAAATTATTGAGTCTGAAGGACAGAAAGAAAAAAATTGAAGA
ATAATGAACAGAGCCCAGGCAACCATGAGACATCAACAAAAGTGAACCAACATACACATT
CTGGGACTCCCAGAAGGAGAAAACAGAGAAAAAGGGACAGAGAGATTATCTGAAGAATTA
ATGGCCAAAAACTTCCCAAGTTTGATGAAAGACACGAATATAAACATACTAGAAGCTCAA
GGAATTCCAAATTGGATGAACTCAAAGAGGTGCACACTGAGTCACATTAACATCAAACTG
TTGAAAGCCAAAGAGAGAATCTTGAAAAAGCAGTGAGAGAGAAGCGACTTGTTACATGCA
AGGGATCCTCAGTGAGATTATGAGCAGATCTCTCATCAGAAACTTTGGAGGCCAGGAGGC
AGTGGGCTGATATATTCAAAGTGCTAGAAGAAAACAATCTGTCAACCAAGAATCGTGTAT
CTGGCAAAACTGTCTTTCAAAAGTGAAGGAGAAATTAAGACATTTCCAGATAAACAAAAG
CTGAGGGAGTTTCCTTACCACTAGACCTGTCTTGCAAGAAATGTTAAAGGGGCTG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.1 |
| SRP021940_embryo | 0.05 |
| SRP021940_placental_villous | 0.09 |
| SRP021940_synovial_membrane | 0.08 |
| SRP021940_testis | 0.3 |
Parental protein coverage
Changes in the retrocopy sequence
