RetrogeneDB ID:
retro_ecab_864
Organism:
Horse ( Equus_caballus )
Location:
5:71703327-71703927 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
72.95 %
Coverage:
56.67 %
Frameshifts:
3
Stop codons:
6
Parental gene:
Parental gene symbol:
AMZ2
Parental gene aliases:
No gene alias available
Parental gene description:
archaelysin family metallopeptidase 2 [Source:HGNC Symbol;Acc:28041]
Genomic region (view in browser)
>retro_ecab_864
CAGTTCTTAAAAGAGAAGAAACCTAAAGATGCCTTCTGTGTTGTGGGAAAACAATGGTTG
AGCTTTACCAAAGAGACCACTAGAATTTTGTCTTTGAACACACCCCTTTGACAGATGGTG
TGGGGATATTAGCTTTGCCGCGTATGGCAATTTTTATAGCTCATGCTATGAAGGCAAAGT
AAAGAAGCTGCAGAAAATATCTTCAAGTGACTCTTCGATTTTTGATAAGTATTACATTCC
TGAAGTGACTAGTGTTTTGCTGCTTCGATCCTGTAAGACTTGACCTATGAGATTGGACAC
AGATTTGGACTTTGACACTGCCAGTGGCTTGCATGCCTAACATAAGGCTTCAGCCACTTG
GAAGAAGCTGCCTGGAGCCCCCTAAACCTTTGTCCTATCTGTTTACACAAGTTGCAGTGT
GCTATTGGTTTCAACCTTACAGAAAGATAGAAAGTGCTGGTGAGGTAGATTGACAAACCT
GCTGACAAAGCTGGAGTCCCTGAGAAACGTAGTGAGGATAATGTGAATTTGCCAAAACCT
GTTGAAGCCTTTAAGGAATGGAAAGAATGGATAATAAAATGCCTTGCTGTTCTCTAAAAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
