RetrogeneDB ID:
retro_ecab_868
Organism:
Horse ( Equus_caballus )
Location:
5:84941118-84941578 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
69.81 %
Coverage:
99.37 %
Frameshifts:
2
Stop codons:
1
Parental gene:
Parental gene symbol:
RPS11
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S11 [Source:HGNC Symbol;Acc:10384]
Genomic region (view in browser)
>retro_ecab_868
AGTGACTCCTGGACTGAGCATGCCTGCCAAAGCAGCCAACCATCTTTCAAAATAGGAGGA
GGGTCCTGCTGGGAGAAACTGGCAAGAAGCTCCTGCAGTACTACAGGAACAGCGGTCTGG
GCTTCACGACACCTAAAGAGGCCAGTGAGGGCACCTACATTGACAAGAAGTGGCCTGTAC
TGGTAATGTCTCCATCCGAGGGCAGGTCCTGTCTGGCACGGTGACCAAGGTGAAGATGCA
GAGAACCATTGTCATCTTCAGGAACTACCTTTACTACATCCAAAAGTCCAGCTGCTTCGA
GAATTGCCGTAAGAACATGTCCATGCACCTGTCCCTCTGTTTCAGGGACATCTAGATCAG
TGACATTGTGGGTGAGTGCCAGCCCCTGAGCAAGACCATGTGCTACGACATGCTCAAGGT
CACCAAGGCTGCTAGCACCATGAAGCAATTCCAGAAGTTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.15 |
| SRP021940_embryo | 0.14 |
| SRP021940_placental_villous | 0.13 |
| SRP021940_synovial_membrane | 0.1 |
| SRP021940_testis | 0.12 |
Parental protein coverage
Changes in the retrocopy sequence
