RetrogeneDB ID:
retro_ecab_874
Organism:
Horse ( Equus_caballus )
Location:
6:27557544-27557811 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
70.79 %
Coverage:
76.72 %
Frameshifts:
0
Stop codons:
1
Parental gene:
Parental gene symbol:
EFCAB2
Parental gene aliases:
No gene alias available
Parental gene description:
EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166]
Genomic region (view in browser)
>retro_ecab_874
ATGGAGAAGATCAGAAAAATCTTTAGTTCATTAGGATGCTACTCTAGTCAAGGAGAGCTG
CAGGATCTGATTGCAGAGGGAGAGGAAGAAGAACCCACTGGATACGTTTGATTCAAAAAA
TTTCTTCCAGTGATGACTGAAGCACTGCTAGAAAACGGACAGAGACCAATTCCAGAGGAT
ATCCTTCTTCGATTTTTTGAGGTCTTGGAGCCAGCAAAATGTGGGTCTCTTTCTAAGGAA
GAACTGAGCAAGTACATGACTGAAGAA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.12 |
| SRP021940_cerebellum | 0.45 |
| SRP021940_embryo | 0.48 |
| SRP021940_placental_villous | 0.72 |
| SRP021940_synovial_membrane | 0.36 |
| SRP021940_testis | 0.71 |
Parental protein coverage
Changes in the retrocopy sequence
