RetrogeneDB ID:
retro_ecab_886
Organism:
Horse ( Equus_caballus )
Location:
6:66204470-66205286 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
74.09 %
Coverage:
54.08 %
Frameshifts:
2
Stop codons:
4
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6V4L4]
Genomic region (view in browser)
>retro_ecab_886
CAAGTTTCTTATATGAGCATTTTAGGAATTAAACCGGAGTTTGTAGATAATACTTTGTTA
TTCAGGGATTTGGCAATGTGGGCCTGTACCCTATGAGATCATTACATCATATTGGTGCTA
AATGTCTTGGTGTTGGTGAATCTAGTGGGAGCATGTGGAATTTAGATGGCATTGACTCAA
AGAAGCTAGAAGACTTCAAATTGCAATGTGGATCAATCCTGGGTTTCCCCAAGGCAAAGC
CCTAGGAAGGAAATGTCTTCTAAGCAGACTGTGACATACTAATCCCTGCTGTCAATGAGA
AGCAGTTGACCAAATCCGGGGCATCCAGAGTCAAAAGCCAGGATTGTTGCTGAAGCTGCC
AAAGGACCGACAACTCTAGAAGCTGATGAGATTTTTTTGGAGAGGAACGTTATGGTTATT
CCTGATCTCCTCTTAAATGCTGGTACAATGACAGTATCTTAGTTGGAGTGGCTGAAGAAC
ATAAATCATGTCAGCTATGGCCATTTGAGCTTCAAGTATGAAAGAGATTCTAACTACCAC
TTCCTCATGTCTATTCACAGGAGTTTAGAAAGAAAATTTGGAAACCACCATGGAACTATT
TCCGTCGTAACCACAGCAGGGTTCCAAAACAGAATATCAGGTACATCTGAGAAAGACATC
GTGCATTCTGGCTTACCTTACACTATGGAGTTTTCTGCCTGGCAAATCATGCCCAGCACC
ACAAAGTATAACCTAGGATTGGATCTGAGAACAGCTGCCTATGTCAACAGCATTTAGAAA
GTCTTCAGGGTGTACAAGGAAGCTGGTTTGACCTTC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 2.14 |
Parental protein coverage
Changes in the retrocopy sequence
