RetrogeneDB ID:
retro_ecab_90
Organism:
Horse ( Equus_caballus )
Location:
2:82265092-82265575 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
96.25 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]
Genomic region (view in browser)
>retro_ecab_90
ATGACCAACACGAAAGGAAAGAGGAGAGGCACCCGCTATATGTTCTCTAGGCCGTTTAGA
AAACATGGAGTTGTTCCTTTGGCCACATACATGCGAATCTACAAGAAAGGTGATATTGTA
GACATCAAGGGAATGGGCACTGTTCAAAAAGGAATGCCCCACAAATGTTACCATGGCAAA
ACTGGAAGAGTCTACAATGTTACCCAGCATGCTGTTGGCATTATTGTAAACAAACAAGTA
AAGGGTAAGATTCTTGCCAAAAGAATTAATGTACGTATTGAGCATATTAAGCACTCTAAG
AGCCAGGATAGCTTCCTGAAACGTGTGAAGGAAAATGATGAGAAAAAGAAGGAAGCCAAA
GAGAAGGGTCCTTGGGTTCAACTGAAGCACCAGCCTGCTCCACCCAGAGAAGCACACTTT
GTGAGAACCAATGGAAAGGAGCCTGAGCTGCTGGAAACCATTCCCTATGAATTCATGGCA
TGA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.52 |
| SRP021940_cerebellum | 0.4 |
| SRP021940_embryo | 11.79 |
| SRP021940_placental_villous | 2.33 |
| SRP021940_synovial_membrane | 3.88 |
| SRP021940_testis | 1.6 |
Parental protein coverage
Changes in the retrocopy sequence
