RetrogeneDB ID:
retro_ecab_907
Organism:
Horse ( Equus_caballus )
Location:
6:57672163-57672699 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
78.89 %
Coverage:
53.75 %
Frameshifts:
1
Stop codons:
1
Parental gene:
Parental gene symbol:
G3PDH
Parental gene aliases:
GAPDH, G3PDH
Parental gene description:
glyceraldehyde-3-phosphate dehydrogenase [Source:RefSeq peptide;Acc:NP_001157328]
Genomic region (view in browser)
>retro_ecab_907
ACTGGCAAAGTCGATATTGTCACCATCAACGACTCCTTCATTAGCCTCAACTACATAGTC
TGCATGTTCCAGGATGATTCCACTCATGGCAAGTTCAATGGCACAGTCAAAGTTGAGAAC
TGGAAGCCTGTCATCAATGGAAAGCTTGTCTCCATCTTCAAGGAGTGAGATCCTGCCAAT
ATCAAATGGGGTGATGCTGCTGCTGAATATGTTGTTGAATCCACTGGTGTCTTCACTGGC
TTGGAGAAGACTGGGGCCCACTTGAAGGGTGGAGCCAAAAGGGTCATCATCTCTGCCTCT
TCTGCTGATGCCCCATGTTTGTGATGGGCATGAACTATGAGAAGTATGACGACTCCCTCA
AGGTTGTCAGCAGTGCCTCCTCCACTACCAACTGCTTGGCCCCCTTGGCCAAGGTCATCC
ATGACAACTTTGGCATGATAGAGGGATTCGTGACCATAGTCCATGCCATCACTGCCACCC
AGAAGACCATGGATGGTCCCTCTGGGAAGCTGTGGTGTGATGGCCATGGGGCTGCC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
