RetrogeneDB ID:
retro_ecab_911
Organism:
Horse ( Equus_caballus )
Location:
6:61772425-61773132 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
68.05 %
Coverage:
76.55 %
Frameshifts:
5
Stop codons:
3
Parental gene:
Parental gene symbol:
PPP4C
Parental gene aliases:
No gene alias available
Parental gene description:
protein phosphatase 4, catalytic subunit [Source:HGNC Symbol;Acc:9319]
Genomic region (view in browser)
>retro_ecab_911
ATGGCAAAGATCAACTACATGGACAAGCAGATGGAGCAGCTGCTGTGTTGTGAGATCATC
AAGGAGAGGGAAGTCAAGCCCTGTGCGTTAAGGCCAGAGAGATCTTGGTAGAAGACAGCA
GCATGCAGAGGCGTGGACTCTCCAGCCACAGTATGTGGCAACATCCATGGACAAGTCTAT
GACCTCTAGGAGCTGTTAGAGTAGGTGGCAACTTCCCTGAGACCAACTACCTCTTCACAG
GAGACATTGTGGATCGTGGTTACTATGGCATCATTGAACGTTCCTCTTTCTGTTGGACGT
TGAGGTTTGTTATCCTTACCGCATCACCCTGATCCCAGGCAACCATGAGAGCCACCAGAC
CACCCAGGTCTACAGCTCTTATGATGACTGCCCGCGTAAATATGGCTTGGTGACTATGTA
GCAGTACTGCCCTGAGATCTTTGACTACCACAGCTTTGTTGGCCGTCATCTATGATAAGA
TCTTCTGCATGCACAGAGGCCTCTCCCCATCCATGTAGACCCTGGACCAGACCCAGAGGG
TTGACCGAAAGTCAGGGGTGCCTCATGACTGGCCCATGAGTGACCTGCTCAAGTCTGACC
ATGAAGATACAACAGGCTGGGATGCGAGCCCCCGTAGGGCTGGCTACCTGTTTGGCAGTG
AGTTGGTGGCCCAGTTCCATGCAGCCAATGGCATTGACATGACCTGC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
