RetrogeneDB ID:
retro_ecab_915
Organism:
Horse ( Equus_caballus )
Location:
6:77912658-77913198 (-)
Status:
KNOWN_PSEUDOGENE
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
98.89 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
DCTD
Parental gene aliases:
No gene alias available
Parental gene description:
dCMP deaminase [Source:HGNC Symbol;Acc:2710]
Genomic region (view in browser)
>retro_ecab_915
CCCAACATGAGTGAAGTGTCCTGGAGAAAACGTGATGACTATTTGCAGTGGCCTGAGTAT
TTCATGGCGGTGGCCTTCCTATCGGCACAGAGAAGCAAAGATCCAAATTCGCAGGTTGCA
GCCTGCATCGTGAATGCAGAAAACAAGATTGTCGGGATTGGGTACAATGGAATGCCAAAT
GGGTGCAGCGATGACCTGTTGCCTTGGAGGAGGACAGCGGAGAATAAGCTGGATACCAAA
TACCCTTACGTGTGCCATGCCGAGCTCAATGCCATTATGAACAAAAACTCGGCCGACGTG
AAGGGCTGTACCATGTACGTCGCCTTGTTCCCGTGCAATGAGTGTGCTAAGCTCATCATC
CAGACAGGTATCAAAGAAGTTATTTTCATGTCTGATAAATACCATGATAGCGATGAGGCA
ACCGCTGCCAGGCTCTTGTTTGATATGGCTGGGGTTACCTTCAGGAAATTCACACCAAAG
TGCAGCAAGATTGTCATTGACTTTGATTCAATTAACAGCAGACCGACTCAGAAGCCTCAG
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 1.37 |
| SRP021940_placental_villous | 0.45 |
| SRP021940_synovial_membrane | 2.14 |
| SRP021940_testis | 0.47 |
Parental protein coverage
Changes in the retrocopy sequence
