RetrogeneDB ID:
retro_ecab_946
Organism:
Horse ( Equus_caballus )
Location:
7:6197476-6198190 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
81.93 %
Coverage:
74.61 %
Frameshifts:
0
Stop codons:
1
Parental gene:
Parental gene symbol:
RFC5
Parental gene aliases:
No gene alias available
Parental gene description:
replication factor C (activator 1) 5, 36.5kDa [Source:HGNC Symbol;Acc:9973]
Genomic region (view in browser)
>retro_ecab_946
AAGCTGCTGCACCTGCTTCTCTATGATCCTCCAGGGACAGGAAAGACATCCACCATCGTA
GCCTGTGCTAAACAGCTGTACAAAGATAAAGAATTCAGCTCCATGGTCTTAGAGCTGAAT
GTTTCAGATGACCAAGGAATAGATATCATTTGGGGACTGATCCTGAGCTTTGCTAGCACA
GGGACACTATTTAAGAAAGGCTTTCAAATAGTGATCTTGGATGAAGCTGATGCCATGAGT
CAAGATGCCCAGAATGCCTTGAGGAGAGTGATTGAGAAATTTACTGAGAACACCAGATTT
TGCCTCATTTGTAACTGTCTGTCAAAGATCATCCCGACCTTGCAGTCCCGATACACAAGG
TTCTGATTTGCTCCCCTCACTCCTAAACTCATGGTTCCCTGCCTGGAACATGCTGTGGAA
GCAGAGAAAGTTGGTCTAAGCGTAGACAGGATGAAAGCACTTGTAACTCTCTCCAGTGGA
GACATGCGAAGGGCCCTGAACATTTTGCAGAGCACCAATATGGCCTTTGGAAAGGTGACA
GAGGAGACTGTCTACACCAGCACAGGGCACTCACTCAAGTCAGACGTCACCAACATTCCA
GACTGGGTGTTGAATCAAGACTTCACCACAGCCTACAGGAATGTTAGGGAGCTGAACACT
CTGAGGGGCTTGGCGTTACGTGATATCCTGACAAAGATATACTTGCTTGTGCAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.0 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.0 |
Parental protein coverage
Changes in the retrocopy sequence
