RetrogeneDB ID:
retro_ecab_949
Organism:
Horse ( Equus_caballus )
Location:
7:17801693-17802243 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
61.05 %
Coverage:
64.51 %
Frameshifts:
1
Stop codons:
2
Parental gene:
Parental gene symbol:
RPS2
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S2 [Source:HGNC Symbol;Acc:10404]
Genomic region (view in browser)
>retro_ecab_949
AAGATTTTGAAGATTATACTCATGCAAAAGCAGAGTCATGCTGGCCAGTGGACCAGGTTC
AAGGTATTTGTCGCCATCAGAGATTACAACAGACATGTCAGTGTGGAAGTTAAGTGCTCC
AAGGAGGTGGCCACTGCCTTCCACAGGCTATCATCCAAGCTCTCCATCACTGCAGTGGGG
TGAGGCTACTGGCGGAACAAGATCAGCAAGCCCTACACCATCCTTTGTCACCGGCAGCTC
TATGCTAGTGCATCTCATGCTCACCCCCAGGGGTACTAACATCGTCTACGCCTCTGTGCC
CAAGAAGCTGCCGTTGATGCCTAGTATGGACAACAGCTGCACTTCAGCCAGGGGCTGCAA
TGCCACCCTGGGCAACTCTGCCAAGGCCACCTGTGACGCCATCTCCAAGACCCACAGCTG
TGTCACCCCCAACCTCTGCAGAGAGACCATGTTCACCAAGTGTCCCTATCAGGAATTCAC
TGACCATCTCATAAAGACCCACACCAGAGTCTCCATGTAGAGGATCCAGGCTCCAGCTGT
AGTCGCCACA
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.05 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
