RetrogeneDB ID:
retro_ecab_985
Organism:
Horse ( Equus_caballus )
Location:
8:11139930-11140366 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
64.0 %
Coverage:
54.28 %
Frameshifts:
3
Stop codons:
3
Parental gene:
Parental gene symbol:
YBX1
Parental gene aliases:
No gene alias available
Parental gene description:
Y box binding protein 1 [Source:HGNC Symbol;Acc:8014]
Genomic region (view in browser)
>retro_ecab_985
AATAAATGTGCAGCAGCCTGGGACCATCATAGACACTGTTCACGTCACAGGGGTCCTCCA
CACACCCACCAGCAGAACTACCAGAATAGTGAGAGCGAGAAAAAACGAGGGATCAGAGAA
TGCTCCTGAAGGCCAGGCCCCACAGTGCCAACCTGACCACATGCGGGCCTTGGTCCCCAC
CTTACTACATGCAGAGACGCTATGGGTGACAAGCACAGTGTTCCAGCCCTCCTGTGTAGG
GAGAAGTGATGGAGGGGACTGACAACCAGGGTGCAGGAGAACAAGGCAGACCAGTGAGAC
AGAAGCTGTATCGGGGTATAGACCACAATTCCGCAGGAGCCCTCCTCGCCAAAGACGGCC
CAGAGAAGGTGGTCATGGAGGTCAGGAAAACCAAGGAGATGAGACCTAATGTAAGCAGTC
ACCTCAACATGAGCAC
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.0 |
| SRP021940_cerebellum | 0.05 |
| SRP021940_embryo | 0.02 |
| SRP021940_placental_villous | 0.0 |
| SRP021940_synovial_membrane | 0.0 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
