RetrogeneDB ID:
retro_ecab_993
Organism:
Horse ( Equus_caballus )
Location:
8:40900171-40900877 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
58.09 %
Coverage:
86.76 %
Frameshifts:
3
Stop codons:
1
Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available
Genomic region (view in browser)
>retro_ecab_993
CAACAAATAGTAAATATAAGAAAGAAACAATCAGAGCTAAAGAATACAATAATGGAAATG
AAAAATACACTAGGGGGAATCAACAGCAGATTAGATGATAAAGTACGAATCAGCAGTCTG
GAAGACAAAGTAGTGGAAATCACCAATCAGAATATCAAAAAGAAAATAGAATTTTAAAAA
ATGAGGATACTTTAAGGGACCTCTGGGACAACATCAAGCATAATAACATTCTCATTATTG
GTGTCCCAGAAGGAGAAGAGAGAGAGAAAGGGGCGGAAAATTTATTTGAAGAAATAATGG
CTGAAAACTTCTCTAACTTAGGGAAGGAAACAGACATCCAGATCCAGGAGAGTTCCAGAC
AAGATGAACCCAAAGAGATTCACACTAAGATATATTATAATTAAATTGGCAAAAGTTAAA
GATAAAGAGAGAATCTTAAAGTCAGTAAGAGAAAAACGAGTCACATACAAAGGAACCTCC
CTAAGACTATAAGTTAATTTTTCAGCAGAAACTTTGCAGGCAAGAAGGGAGTGTCATGAT
ATATTTAAAGTGCTGAAGGGAAAAAAACTTACAACCAAGAATACTCTGCCCAACAAGGTT
ATCATTCAGGATTGAAAGAGACATAAAGAGTTTCCCAGACAAGCAAAAACTAAAGGAGTT
CATCACCACTAAACTGGCCTTACAAGAAATGTTAAAGGGTTTTCTT
| Library | Expression (reads per million mapped reads) |
|---|---|
| SRP021940_articular_cartilage | 0.81 |
| SRP021940_cerebellum | 0.0 |
| SRP021940_embryo | 0.34 |
| SRP021940_placental_villous | 0.27 |
| SRP021940_synovial_membrane | 0.94 |
| SRP021940_testis | 0.06 |
Parental protein coverage
Changes in the retrocopy sequence
